Insertion junction: CLIP2.079298_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079298
Chromosome:chromosome 12
Location:9582117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539700 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCATAACATCATCGCAGCAATTGGGAAAGTGAAAGTTCGCGTTTTGA
Internal bar code:GAGTATACACTTTACCAAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2607
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGGCCACTGCATCAAAG
Suggested primer 2:TGCCATGCAGCCAATTCCTA