Insertion junction: CLIP2.079302_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079302
Chromosome:chromosome 8
Location:3790295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATGCTCTTCTTTGCCGTCAGGTGCTCGTAGCTAAGCAGTGGGCGTAAA
Internal bar code:TAGTGAAGTACACGTGTGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2689
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCATCAGGCCTCATCCT
Suggested primer 2:ATCTAGCCCGCATCAGAAGC