Insertion junction: CLIP2.079305_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079305
Chromosome:chromosome 15
Location:1168877
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre15.g639134 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAGCAGCATGTTGTGTCAGTTTCGTATTCAGAGATGGTGCTGTCGTCG
Internal bar code:CAATTTGCTATAAAGTTTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:889
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATCCCCGCAACAAAACG
Suggested primer 2:CAGTCGCCACCATCACTTCT