Insertion junction: CLIP2.079307_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079307
Chromosome:chromosome 1
Location:6399734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g046652 (1 of 3) K01866 - tyrosyl-tRNA synthetase (YARS, tyrS); Putative tyrosyl tRNA synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGACGACAGTTGAGTTGCATCAACGATTATCAAGCTACGCCTGCGAT
Internal bar code:TAAGTTGACTCCATGTCGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3581
LEAP-Seq percent confirming:75.7143
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTTCATACAGCCACCCT
Suggested primer 2:CTTCATCCGCAATGAGCTGC