Insertion junction: CLIP2.079311_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.079311
Chromosome:chromosome 6
Location:1700123
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g262450 VTE7 (1 of 2) 2.7.1.182 - Phytol kinase; Putative phosphatidate cytidylyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAATTGTCGATGGTGGTCATGCCACGAGCATCGGCAAGTGAACCCCTA
Internal bar code:GGTACTGCCCGCCCTAAGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:139
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGCGGTAGTCTCGATG
Suggested primer 2:GTTGTTTTCGGGCGATTGCT