Insertion junction: CLIP2.079318_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079318
Chromosome:chromosome 16
Location:1099526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649600 PUF4 Puf protein; (1 of 1) K14790 - nucleolar protein 9 (NOP9) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAATCCAGACACTTATTGACGAGTGTTGCGGAACTAATGCGTACGTAG
Internal bar code:TACAAAATTGACAGAACACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3219
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGTTGTTTGGACGTGG
Suggested primer 2:TCATCGTCGACCAGGGTTTG