Insertion junction: CLIP2.079318_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079318
Chromosome:chromosome 16
Location:1099527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649600 PUF4 Puf protein; (1 of 1) K14790 - nucleolar protein 9 (NOP9) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGATGCCGGAACGGCAAAACCCTGAGAGCTGTGCGTTGTTGCCTCG
Internal bar code:CGGGCTATTAGTAAAGTGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2669
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCGTCGACCAGGGTTTG
Suggested primer 2:CTGCAGTTGTTTGGACGTGG