Insertion junction: CLIP2.079321_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079321
Chromosome:chromosome 12
Location:2366947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCGCCGTGCGACCCGTCTGCTACATGCGGACTCGTCTCACCCATGT
Internal bar code:AGGCGGAGCAAAAGCGGTCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:283
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTGACTTGCTGCTGTCT
Suggested primer 2:GTAATAAAGCAGCCGCCAGC