Insertion junction: CLIP2.079326_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.079326
Chromosome:chromosome 17
Location:5965285
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g742300 GST14,FAP179 Flagellar Associated Protein 179; (1 of 6) K00799 - glutathione S-transferase (GST, gst) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCCCACCGCTCCATCCAGCTTTCTCCGCTTCCCCACCTCCTTCTTGA
Internal bar code:GTCCAGGTGCAAGTTCGCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:834
LEAP-Seq percent confirming:37.8378
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGGTTGCAGCTGCCAAA
Suggested primer 2:CCATGACTACGGCCCATCTC