Insertion junction: CLIP2.079327_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079327
Chromosome:chromosome 17
Location:686521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g700550 (1 of 2) IPR000210//IPR008974//IPR011333 - BTB/POZ domain // TRAF-like // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGAGGTGGAGCAGTTGGCACCCGCTCCGTGCGCCACTGATGAATTGC
Internal bar code:GGAGTCAAGGCGCGCCGAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2333
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATGGGGATCAACTGCCT
Suggested primer 2:CTTTGTGGAGGAGCTGGAGG