Insertion junction: CLIP2.079336_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.079336
Chromosome:chromosome 12
Location:3029625
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g501700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTACGAGGTCGACATGGAGATGGAAGAGAAGGCGCTCGTCATGCCCGTG
Internal bar code:AACTTAGGAGTTTTTGGTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:417
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGGTTTCCAGCAACTAT
Suggested primer 2:ATGGCACTACCTGCTCACAC