Insertion junction: CLIP2.079342_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079342
Chromosome:chromosome 7
Location:1040748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319701 (1 of 1) PTHR10071//PTHR10071:SF184 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 10-RELATED 5'UTR
Cre07.g319750 HEL35 (1 of 1) K14807 - ATP-dependent RNA helicase DDX51/DBP6 [EC:3.6.4.13] (DDX51, DBP6); DEAD box ATP-dependent RNA helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGTATGACTGAGCCGACGGCGCAGCAGCCCTTGACTACTTGGTCGGC
Internal bar code:ATGGAGCATGAGCGTTCCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1107
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTGTTTGTTGGTGACCG
Suggested primer 2:AGGACCGCGTTGAAAGACAT