Insertion junction: CLIP2.079343_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079343
Chromosome:chromosome 1
Location:32004
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g000050 RWP14 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACCACCGGCTGTCGCTGAAGCCGCACAGCCGCCCTACGGCTGGGCG
Internal bar code:CCTAAGCTCTCTCCTGCGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:487
LEAP-Seq percent confirming:17.6471
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGTGCTTTCAGCCTCAG
Suggested primer 2:ACCGCCCTCCTTCTCCTTAT