Insertion junction: CLIP2.079348_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079348
Chromosome:chromosome 16
Location:1542521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653350 (1 of 1) 3.5.1.108 - UDP-3-O-acyl-N-acetylglucosamine deacetylase / UDP-3-O-acyl-GlcNAc deacetylase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCATGGTGTCTTTAACAAGCCTGCTAGTGGCTTTTTTCTCCTGGCTGC
Internal bar code:TAGTGCCTCAACTACGTGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1299
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCACAGGGAAGGAGAAT
Suggested primer 2:CGCGCATTGTGCATTCTACA