Insertion junction: CLIP2.079351_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.079351
Chromosome:chromosome 17
Location:122280
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g696750 (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCCTGGTGGATTTATTCGGCAGGAAATCAAGTAACCCCACATGCGTC
Internal bar code:CTGCGTCTATGTTGACTTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:6.89655
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGGCCGGTGACTACTTG
Suggested primer 2:AGAGCACATCACAGACCACG