Insertion junction: CLIP2.079353_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.079353
Chromosome:chromosome 7
Location:4175867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342250 PFD2 Prefoldin molecular chaperone, subunit 2; (1 of 1) K09549 - prefoldin subunit 2 (PFDN2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCCATTATATGCATCCGAATCCAAACATAGCACAGCTATCATCCCGG
Internal bar code:CACCCGCTGATTCGCTGTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:832
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGTGTGGCGAGATCAAA
Suggested primer 2:CTCCAATTCTCGGCGCATTG