Insertion junction: CLIP2.079355_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079355
Chromosome:chromosome 16
Location:1136146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649900 HTR40,HTR24 Histone H3; (1 of 35) K11253 - histone H3 (H3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGATATTCCGGTAATATCTCCGCCGTGCGACTTTGAGTTGGTGCCAG
Internal bar code:CGTGGCGAATAATGATTCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3085
LEAP-Seq percent confirming:98.6667
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTAGGGGGTAGCTGGTA
Suggested primer 2:AGCCTGTATCGCGTGATAGC