Insertion junction: CLIP2.079355_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.079355
Chromosome:plastome
Location:33140
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802283 rps4,ChreCp020,2716955 30S ribosomal protein S4; (1 of 1) PTHR11831:SF4 - 37S RIBOSOMAL PROTEIN NAM9, MITOCHONDRIAL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCTGTAGAACTTATTACTAAAGGAAACGTGCGAGTAAATAATAAG
Internal bar code:CATCTTGTGTAAATTCTTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:137
LEAP-Seq percent confirming:19.2308
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCACTGACGTCCACTAAT
Suggested primer 2:TGCCAAGGAAAATGTTGCGG