Insertion junction: CLIP2.079356_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079356
Chromosome:chromosome 6
Location:5757131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288650 (1 of 2) PTHR32100//PTHR32100:SF10 - FAMILY NOT NAMED // OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC; Putative Omega-6 fatty acid desaturase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATACAGTAGTCGACTTGCACGCAGACCGATCACGGCCCTGCGTGCCTGT
Internal bar code:CAGGAGACTTCTGATAATTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1360
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCGACGAAATTGAGGCA
Suggested primer 2:ACACACGGTCGAAGAGTGTC