Insertion junction: CLIP2.079356_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079356
Chromosome:chromosome 6
Location:5757135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288650 (1 of 2) PTHR32100//PTHR32100:SF10 - FAMILY NOT NAMED // OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC; Putative Omega-6 fatty acid desaturase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACTACTTGATGACGTCAGGGTGCTTGAAGTTGATGTCACGAGGTTGTG
Internal bar code:CAATAAGCAAGCGCCGGCTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2342
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACGGTCGAAGAGTGTC
Suggested primer 2:TGGTCGACGAAATTGAGGCA