Insertion junction: CLIP2.079366_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079366
Chromosome:chromosome 12
Location:1662319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486550 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAAATAAGGACGCGCATGCACGTGCACATCTCGTGCACCTGGTGGTGT
Internal bar code:AGCCTATGCATAATGTGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2378
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGTCTGTGGCGTCTCTT
Suggested primer 2:AGGAACTGACGCAAGCATCA