Insertion junction: CLIP2.079367_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.079367
Chromosome:chromosome 3
Location:3115933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164500 (1 of 1) IPR026571 - Transmembrane protein 186 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAAATTCATTTGCGTTTCACTTGAGCACCACGAAACGGACGGAGCCC
Internal bar code:GATATATCCGTGGATGGGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1018
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGACACCACGTACACCTCAA
Suggested primer 2:CTCCTCTTACGCATCGTCCC