Insertion junction: CLIP2.079372_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079372
Chromosome:chromosome 2
Location:7877086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145800 MDN3,MDH3 NAD-dependent malate dehydrogenase 3; (1 of 1) K00025 - malate dehydrogenase (MDH1) 3'UTR
Cre02.g145850 FAP112 Flagellar Associated Protein 112; (1 of 3) IPR006130 - Aspartate/ornithine carbamoyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCACGGGGCCGTAACCCAAGCCGTAACCATGGGCCGCAAACGATGATA
Internal bar code:GACTATGTTATACCTTGCAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2868
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGAGTCAGAGGAGGGCA
Suggested primer 2:CTGGTAGCGTGAACCACCAT