Insertion junction: CLIP2.079380_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079380
Chromosome:chromosome 10
Location:378528
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCACATCAGCAGCATCAGACACAGGGTTGATGGCGTGTGAGTACGTG
Internal bar code:AAATTGCCTGAACATAGGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:216
LEAP-Seq percent confirming:30.8824
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:ACACATGCACACACACATGC
Suggested primer 2:TCCCTCCTTCCTCATCCCTG