Insertion junction: CLIP2.079384_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079384
Chromosome:plastome
Location:17481
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802269 ChreCp007,clpP,2717015 (1 of 9) 3.4.21.92 - Endopeptidase Clp / Protease Ti; ATP-dependent Clp protease proteolytic subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATATTTTATCTAAAGATTTTTCACCTAATCAAGACAAAGATTCTGCTA
Internal bar code:CTCTTGGGGCTAGGTACCATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:596
LEAP-Seq percent confirming:5.76923
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGATGCAGCTACACCT
Suggested primer 2:AGCCTTCGTGATGGAACTGG