Insertion junction: CLIP2.079386_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.079386
Chromosome:chromosome 17
Location:5745603
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g740850 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATATGAGCGCTAGCGTGGAGGTCTCCCTCGGCGCGGGCCTGGCATCGT
Internal bar code:CTCATTATGGATCTGTAGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:94
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTAGGCGTACTGCTGGTA
Suggested primer 2:TACGTGCTGCAATCCAACCT