Insertion junction: CLIP2.079393_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079393
Chromosome:chromosome 9
Location:5956420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412175 (1 of 2) 3.7.1.8 - 2,6-dioxo-6-phenylhexa-3-enoate hydrolase / HOHPDA hydrolase 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCGTCGACCCTCCTGGGCTTCTGTGGTACGGTAACGCGCGCGGAGAC
Internal bar code:TGACTCATATAAAAATTTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:78
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAATGTTCGGGCAGACGA
Suggested primer 2:CATCCATCCACCGTTCCCTC