Insertion junction: CLIP2.079393_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079393
Chromosome:chromosome 9
Location:5956427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412175 (1 of 2) 3.7.1.8 - 2,6-dioxo-6-phenylhexa-3-enoate hydrolase / HOHPDA hydrolase 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAGGAGAGCGTGCCGTGGAGGACCATGCTCCACAAACATGCACACGC
Internal bar code:AAAGGGTCAAGCGGAGTAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:371
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCATCCACCGTTCCCTC
Suggested primer 2:TTGAATGTTCGGGCAGACGA