Insertion junction: CLIP2.079398_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079398
Chromosome:chromosome 12
Location:3821194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514800 (1 of 2) K06287 - septum formation protein (maf) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAACTAGTACATAAGGACTGGTCACTGGTGGAGTTTACAGTACACGT
Internal bar code:GCTCGATCCTTTTTAAGAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1667
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTTCTTTCTGGGCTCTG
Suggested primer 2:CAACCTGTGTGTTGCATGGG