Insertion junction: CLIP2.079399_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079399
Chromosome:plastome
Location:25633
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802275 rps19,ChreCp013,2717056 30S ribosomal protein S19; (1 of 1) K02965 - small subunit ribosomal protein S19 (RP-S19, rpsS) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGTTTCCTAAACTAATTTCTATAAACTACTATTCTTTGCAGTTAACCG
Internal bar code:AAGATTGTCGGTACTCAGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:434
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTTTGGCAGCGTTCATG
Suggested primer 2:CTGCCACTGACGTCCACTAA