Insertion junction: CLIP2.079404_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079404
Chromosome:chromosome 9
Location:4536892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401108 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATAAGAAAGGTCCCCGCTGCCAAGTCCTGACCCCGGCCCGGCCGAAT
Internal bar code:ATAGTAAATAGTTTAATGAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2737
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTCGTTTCGGTGGAGTC
Suggested primer 2:GAGAGGGAGGTGCAGTCCTA