Insertion junction: CLIP2.079408_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079408
Chromosome:chromosome 7
Location:2986332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g333400 MMP23 Matrix metalloproteinase; (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTACAATGTATTCTTATGGAAGGAAGGTAACGAATGCGAATGAGAGAC
Internal bar code:GGACTCTTTTATCTCAGGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3054
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGCGTCTGAGCCAGAAT
Suggested primer 2:GACTTCTCCGTCCGGCATAG