Insertion junction: CLIP2.079409_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079409
Chromosome:chromosome 9
Location:1765258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398200 (1 of 1) PTHR23244//PTHR23244:SF304 - KELCH REPEAT DOMAIN // KELCH DOMAIN-CONTAINING PROTEIN 4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCTACTAGAATCCACGGCCCTGAATTGAAGCGACCTGCCAGCTCATT
Internal bar code:GAGTTGAATAAAATGACAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:660
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTCATGCTTTCCCGAT
Suggested primer 2:CATGAAGTCACTGCCATGCG