Insertion junction: CLIP2.079412_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079412
Chromosome:chromosome 9
Location:1567903
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g399073 (1 of 2) PTHR14209:SF9 - ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGTCCGCTCATCGATCAGATCCACACCGTAATATGCCCCGGCCTTCG
Internal bar code:ACGACAGGCGGTCTCCCCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAACTGAACTCGGCTGGA
Suggested primer 2:CGGCGTAAATGGCAACGTAG