Insertion junction: CLIP2.079414_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079414
Chromosome:chromosome 13
Location:3849811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589450 FBB6L1 (1 of 1) IPR002035//IPR013694 - von Willebrand factor, type A // VIT domain; FBB6 like protein 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTTGCTCTTTGTAGTTATAACTTTATGGTTTTGGCGTTCCGCCTTAAG
Internal bar code:TGTGGTTTTTAAGAAGCTGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAACGTTCTCGCACACGG
Suggested primer 2:GGTGGAAACAAATGTGCCCC