Insertion junction: CLIP2.079415_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079415
Chromosome:chromosome 12
Location:165742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g484400 FKM7 DNA methylase in the FkbM family; (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCCCGTCGTCCCCGGAGGGTGGGAAATCCGGAAAGTTCTGGATTGTG
Internal bar code:TGGGAACGGGTGTGTGGTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2154
LEAP-Seq percent confirming:36.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:64
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTGCGTTGCGTGATTAG
Suggested primer 2:CTGTGGGACATTGGCTGGAT