Insertion junction: CLIP2.079419_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079419
Chromosome:chromosome 17
Location:4748067
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g733100 (1 of 1) IPR000104//IPR003882 - Antifreeze protein, type I // Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGGCCGTTCGCGTGGCGACGGTTGTGTCTTCAGGATCAGAAGCTAA
Internal bar code:TGACAAAACGCTGTTGGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:8.69565
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCATTGCCGAGGAAGGTGAC
Suggested primer 2:CACGCGCGCAACATTACATA