Insertion junction: CLIP2.079425_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079425
Chromosome:chromosome 10
Location:4059381
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g447800 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGAAGAATAAGAAGGCAGCCAGGCCCAGAGCCGGGCCTTTGGCCCGA
Internal bar code:ATTATTGGATATATCGATAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:131
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGAGAGGGTGCAAACTC
Suggested primer 2:AACGTCAAACCAATGCAGCC