Insertion junction: CLIP2.079428_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079428
Chromosome:chromosome 10
Location:5506624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457950 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGAGCCACAATATTGTGCTGTTTTGCTATCGCTTGTCCTCAGGCATGA
Internal bar code:CTGGACCACAAGTTCTGTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1780
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGATGGCTGACCTGCAC
Suggested primer 2:GAGCCCACCTGACAAGTACC