Insertion junction: CLIP2.079436_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079436
Chromosome:chromosome 12
Location:8270947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551503 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTGCGTATCTGGGGCTTCGTTGGGGGAGAGGGCTGATTGACTCGAA
Internal bar code:GTCGTCCAAAAAGTGACCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1952
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGCTGGGTTGATAACG
Suggested primer 2:GCTATGGCCAAGTCGTTTGC