Insertion junction: CLIP2.079437_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079437
Chromosome:chromosome 4
Location:3095165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225650 (1 of 1) PF00031 - Cystatin domain (Cystatin) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGAGCGTCATTTGCTGCCGCAATGCACTTGTGTAGACCTACGTGGAC
Internal bar code:GGTGGGATCTCATGCCATCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3728
LEAP-Seq percent confirming:78.2609
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCGGTCCACTGAGAATT
Suggested primer 2:AGAAAGCCGAACCGCAAGTA