Insertion junction: CLIP2.079440_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079440
Chromosome:chromosome 11
Location:3698124
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCAAAAACCGGTGAGCATCAAGCACTTCACATTGTTCTTGCACATATA
Internal bar code:CCCAATAGTTGAAGATTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:207
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGCTAGGATGCCAGAAT
Suggested primer 2:TACACAATGGCCGACGTTGA