Insertion junction: LMJ.RY0402.038546_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.038546
Chromosome:chromosome 9
Location:7035629
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g411200 PSB33,TEF5,LIL8 PSII assembly protein; (1 of 1) PTHR21496:SF0 - RIESKE DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCTGAGTCTGGAGGGCCTGCATTTTC
Internal bar code:GGTCAATCCAAGAGGGCGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:735
LEAP-Seq percent confirming:96.6433
LEAP-Seq n confirming:3167
LEAP-Seq n nonconfirming:110
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGATGGCGTAAATCTGGT
Suggested primer 2:ATGCACAAATGCGGATGTAA