Insertion junction: LMJ.RY0402.038546_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.038546
Chromosome:chromosome 9
Location:7035629
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g411200 PSB33,TEF5,LIL8 PSII assembly protein; (1 of 1) PTHR21496:SF0 - RIESKE DOMAIN-CONTAINING PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGCGAAGTCGTCGCAGGCGCGCGTGCT
Internal bar code:TTAACGTTGCCCCATGTCAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:849
LEAP-Seq percent confirming:99.7194
LEAP-Seq n confirming:17772
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGATGGCGTAAATCTGGT
Suggested primer 2:ATGCACAAATGCGGATGTAA