Insertion junction: LMJ.RY0402.038600_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.038600
Chromosome:chromosome 9
Location:4986335
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g397993 FAP201 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype; Leucine Rich Repeat Flagellar Associated Protein 201 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGGTGCGGAGGGGTTAGAAGCGATTG
Internal bar code:AGTCGTCTGATCCAAGGGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:257
LEAP-Seq percent confirming:99.0375
LEAP-Seq n confirming:21917
LEAP-Seq n nonconfirming:213
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGGAAGGGACATTGCTT
Suggested primer 2:TGGTTCTGGGTCTTGGTTTC