Insertion junction: LMJ.RY0402.038773_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.038773
Chromosome:chromosome_10
Location:746722
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre10.g422800 HER1 antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):AACGTACACCAGCGTCCCAAAGTCTTCAAA
Internal bar code:GGACAAACCCGGTCTGTCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:725
LEAP-Seq percent confirming:98.4061
LEAP-Seq n confirming:1667
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTCCCGCATTGATAAAA
Suggested primer 2:ACCATAATGCCATCCGTCAT