Insertion junction: LMJ.RY0402.038780_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.038780
Chromosome:chromosome 9
Location:7175428
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g412150 PPR11 (1 of 12) IPR002885 - Pentatricopeptide repeat; PentatricoPeptide Repeat protein 11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATGGGGGCTACGGCTACAAACATGAAG
Internal bar code:TCCTACACGTCGGAGGTGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:61
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGAGAGGGAGAGGAGA
Suggested primer 2:AACGCATAGGTTTCAGTGGG