Insertion junction: LMJ.RY0402.038823_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.038823
Chromosome:chromosome 6
Location:3976818
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278194 FAP236 (1 of 3) PF05217 - STOP protein (STOP); Flagellar Associated Protein 236 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTCATGAGGTGTGCGGCGGGGGGCTGG
Internal bar code:CCGTCTCTTGTCAGAGGGCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:99.3648
LEAP-Seq n confirming:3911
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGTGGTTGGCAAAAAT
Suggested primer 2:GCAACAGCTCTCGGATTAGG