Insertion junction: LMJ.RY0402.038835_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.038835
Chromosome:chromosome 9
Location:5160294
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g399067 (1 of 1) PTHR10641//PTHR10641:SF524 - MYB-LIKE DNA-BINDING PROTEIN MYB // ATMYB1 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGTTTAAGAGAATGAGGACAGACAGC
Internal bar code:GCGTCGCCCGTCTTTTGGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:727
LEAP-Seq percent confirming:96.5116
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTGTTGAGCCACTCCTC
Suggested primer 2:GGTCGGTGACCTACTGGCTA