Insertion junction: LMJ.RY0402.038966_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.038966
Chromosome:chromosome_1
Location:5589802
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre01.g039702 sense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):GAGCAGATGCGGTTGTCGCGGTCATCTAGA
Internal bar code:TGCGAGGGCTCAGTCGCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:86.6422
LEAP-Seq n confirming:3535
LEAP-Seq n nonconfirming:545
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAATTTCCCATGAATGAC
Suggested primer 2:TTCGTTTTAGAACATGGGGC